Publications

  1. Jie Zhu#, Jingxiang Wang#, Xin Wang#, Mingjing Gao#, Bingbing Guo#, Miaomiao Gao, Jiarui Liu, Yanqiu Yu, Liang Wang, Weikaixin Kong, Yongpan An, Zurui Liu, Xinpei Sun, Zhuo Huang, Hong Zhou,*, Ning Zhang*, Ruimao Zheng*, Zhengwei Xie* Prediction of Drug Efficacy from Transcriptional Profiles with Deep Learning Nature biotechnology 2021 (https://www.nature.com/articles/s41587-021-00946-z， IF=54.6)
  2. Yiming Wang#, Weikaixin Kong#, Liang Wang, Tianyu Zhang, Boyue Huang, Jia Meng, Baoxue Yang, Zhengwei Xie* and Hong Zhou* Multiple-purpose Connectivity Map Analysis Reveals the Benefits of Esculetin to Hyperuricemia and Renal Fibrosis Int. J. Mol. Sci. 2020, 21(20), 7695; https://doi.org/10.3390/ijms21207695 （IF=4.56）

  3.  Weikaixin Kong#，Miaomiao Gao#, Yuchen Jin, Zhuo Huang*, Zhengwei Xie*, Prognostic model of patients with liver cancer based on tumor stem cell content and immune process, Aging, 2020 (12) 16, 16555-16578.

  4. Weikaixin Kong#, Xinyu Tu#, Weiran Huang, Yang Yang, Zhengwei Xie*, Zhuo Huang* Prediction and Optimization of NaV1.7 Sodium Channel Inhibitors Based on Machine Learning and Simulated Annealing, J. Chem. Inf. Model. May 18, 2020, 60（6）, 2739-2753 (doi:10.1021/acs.jcim.9b01180)

  5. Miaomiao Gao#, Weikaixin Kong#, Zhuo Huang*, Zhengwei Xie* Identification of Key Genes Related to Lung Squamous Cell Carcinoma Using Bioinformatics Analysis. Int. J. Mol. Sci. 2020, 21(8), 2994 (doi:10.3390/ijms21082994)

  6.  Boyue Huang#, Dandan Zhong#, Jie Zhu, Yongpan An, Miaomiao Gao, Shuai Zhu, Weiwei Dang, Xin Wang, Baoxue Yang* and Zhengwei Xie* Inhibition of Histone Acetyltransferase GCN5 Extends Lifespan in both Yeast and Human Cell Lines. Aging Cell 2020;00:e13129. https://doi.org/10.1111/acel.13129

  7.  Yao Dang#, Yongpan An#, Jinzhao He, Boyue Huang, Jie Zhu, Miaomiao Gao, Shun Zhang, Xin Wang, Baoxue Yang* and Zhengwei Xie* Berberine ameliorates cellular senescence and extends the lifespan of mice via regulating p16 and cyclin protein expression. Aging Cell 2020.19.e13060 https://doi.org/10.1111/acel.13060

  8. Dandan Zhong, Zhengwei Xie, Boyue Huang, Shuai Zhu, Guoqian Wang, Hong Zhou, Shuqian Lin, Zhibin Lin, Baoxue Yang*, Ganoderma Lucidum Polysaccharide Peptide Alleviates Hepatoteatosis via Modulating Bile Acid Metabolism Dependent on FXR-SHP/FGF, Cellular Physiology and Biochemistry, 2018, 49(3): 1163~1179

  9. Zhengwei Xie*#, Tianyu Zhang*, Qi Ouyang#, Genome-scale fluxes predicted under the guidance of enzyme abundance using a novel hyper-cube shrink algorithm Bioinformatics 2017 https://doi.org/10.1093/bioinformatics/btx574
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  10. Jing Yang*, Mark McCormick*, Jiashun Zheng*, Zhengwei Xie, Mitsuhiro Tsuchiya, Scott Tsuchiyama, Hana El-Samad, Qi Ouyang, Brian K. Kennedy, and Hao Li, A systematic analysis of asymmetric partitioning of yeast proteome between mother and daughter cells reveals novel “aging factors” and mechanism of lifespan asymmetry PNAS 2015 112(38) p11977-11982

  11. Zhengwei Xie*, Kyle Jay*, Dana L. Smith, Yi Zhang, Zairan Liu, Jiashun Zheng, Ruilin Tian, Hao Li, and Elizabeth Blackburn, Early Telomerase Inactivation Accelerates Aging Independently of Telomere Length Cell 2015 160(5) p928-939 (*co-first authors)

  12. Yi Zhang, Chunxiong Luo, Ke Zou, Zhengwei Xie, Onn Brandman, Qi Ouyang, Hao Li, Single Cell Analysis of Yeast Replicative Aging Using a New Generation of Microfluidic Device. PLoS ONE 2012 7(11): e48275. doi:10.1371/journal.pone.0048275

  13. Zhengwei Xie, Yi Zhang, Ke Zou, Onn Brandman, Chunxiong Luo, Qi Ouyang, Hao Li, Molecular Phenotyping of Aging in Single Yeast Cells Using a Novel Microfluidic Device, Aging Cell 2012, (11) p.599~606

  14. Zheng-Yan Li, Zheng-Wei Xie, Tong Chen, and Qi Ouyang, Noise effect in metabolic networks Chinese Physics B 2009, 18(12) p.5544~5551

  15. Tong Chen, Zhengwei Xie, Qi Ouyang, Expanded flux variability analysis on metabolic network of Escherichia coli, Chinese Science Bulletin 2009, 54(15) 2610-2619

  16. Song Chang, Youdong Mao, Zhengwei Xie, Chunxiong Luo, Qi Ouyang Monte Carlo simulation of melting transition on DNA nanocompartment, Journal of Physics: Conference Series , vol. 29, pp. 18-26, 2006
Google Scholar citations of Zhengwei Xie: https://scholar.google.com/citations?user=kvBMbS4AAAAJ&hl=en